2R9A
Crystal structure of human XLF
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8051828 | 3001502 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051827 | 3001319 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051827 | 3001319 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8051828 | 3001502 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF09302 | e2r9aA1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF09302 | ECOD (1.6) |
A | F_UNCLASSIFIED | e2r9aA2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF21928 | e2r9aA3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21928 | ECOD (1.6) |
B | PF09302 | e2r9aB1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF09302 | ECOD (1.6) |
B | F_UNCLASSIFIED | e2r9aB2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF21928 | e2r9aB3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21928 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
A | 1.10.287.450 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
B | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
B | 1.10.287.450 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09302 | XLF-Cernunnos, XRcc4-like factor, NHEJ component (XLF) | XLF-Cernunnos, XRcc4-like factor, NHEJ component | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015381 | XLF, N-terminal | Domain | |
IPR038051 | XRCC4-like, N-terminal domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q9H9Q4 | :