2M8G
Structure, function, and tethering of DNA-binding domains in 54 transcriptional activators
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | PF02954 | e2m8gX1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF02954 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF02954 | Bacterial regulatory protein, Fis family (HTH_8) | Bacterial regulatory protein, Fis family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
A [auth X] | IPR002197 | DNA binding HTH domain, Fis-type | Domain |
A [auth X] | IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain |
A [auth X] | IPR025662 | Sigma-54 interaction domain, ATP-binding site 1 | Binding Site |
A [auth X] | IPR025944 | Sigma-54 interaction domain, conserved site | Conserved Site |
A [auth X] | IPR003593 | AAA+ ATPase domain | Domain |
A [auth X] | IPR003018 | GAF domain | Domain |
A [auth X] | IPR029016 | GAF-like domain superfamily | Homologous Superfamily |
A [auth X] | IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | Binding Site |
A [auth X] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |