Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2ioua1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Ad2ioua2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Bd2ioub1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Bd2ioub2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Cd2iouc1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Cd2iouc2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Dd2ioud1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Dd2ioud2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Ed2ioue1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Ed2ioue2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Fd2iouf1 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Mtd domain-like Major tropism determinant (Mtd), N-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Fd2iouf2 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like Mtd variable domain Major tropism determinant (Mtd), C-terminal domain (Rauchvirus BPP1 ) [TaxId: 194699 ], SCOPe (2.08)
Gd2ioug_ All beta proteins Single-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin automated matches (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], SCOPe (2.08)
Hd2iouh_ All beta proteins Single-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin automated matches (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyC-type lectin-like8034887 3001261 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2B (2022-06-29)
GSCOP2 FamilyVirulence factor P.69 pertactin8077547 4002821 SCOP2 (2022-06-29)
GSCOP2 SuperfamilyPectin lyase-like8077548 3001746 SCOP2 (2022-06-29)
HSCOP2B SuperfamilyPectin lyase-like8077548 3001746 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Amtd_2nde2iouA1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Amtd_1ste2iouA2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
AFGE-sulfatase_1e2iouA3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
Bmtd_2nde2iouB1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Bmtd_1ste2iouB2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
BFGE-sulfatase_1e2iouB3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
Cmtd_2nde2iouC1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Cmtd_1ste2iouC2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
CFGE-sulfatase_1e2iouC3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
Dmtd_2nde2iouD1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Dmtd_1ste2iouD2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
DFGE-sulfatase_1e2iouD3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
Emtd_2nde2iouE1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Emtd_1ste2iouE2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
EFGE-sulfatase_1e2iouE3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
Fmtd_2nde2iouF1 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: mtd_2ndECOD (1.6)
Fmtd_1ste2iouF2 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: mtd_1stECOD (1.6)
FFGE-sulfatase_1e2iouF3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: FGE-sulfatase_1ECOD (1.6)
GPeptidase_S6_C,Glyco_hydro_120e2iouG1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Peptidase_S6_C,Glyco_hydro_120ECOD (1.6)
HPeptidase_S6_C,Glyco_hydro_120e2iouH1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Peptidase_S6_C,Glyco_hydro_120ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
A2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
A3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
B2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
B2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
B3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
C2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
C2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
C3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
D2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
D2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
D3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
E2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
E2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
E3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
F2.10.10.30 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) CATH (4.3.0)
F2.80.20.10 Mainly Beta Trefoil Tail fiber receptor-binding protein Tail fiber receptor-binding proteinCATH (4.3.0)
F3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme)CATH (4.3.0)
G2.160.20.20 Mainly Beta 3 Solenoid Pectate Lyase C-like CATH (4.3.0)
H2.160.20.20 Mainly Beta 3 Solenoid Pectate Lyase C-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF18454Major tropism determinant N-terminal domain (Mtd_N)Major tropism determinant N-terminal domainThis is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks ...This is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks residues in these lectins identified as binding carbohydrates. The beta-prism and beta-sandwich domains reinforce overall trimeric assembly and therefore may have indirect roles in stabilizing the backbone of the variable region [1].
Domain
G, H
PF03212Pertactin (Pertactin)Pertactin- Repeat