2GJE
Structure of a guideRNA-binding protein complex bound to a gRNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | d2gjed1 | Alpha and beta proteins (a+b) | ssDNA-binding transcriptional regulator domain | ssDNA-binding transcriptional regulator domain | Guide RNA binding protein gBP | GBP21 | (Trypanosoma brucei brucei TREU927 ) [TaxId: 185431 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | ssDNA-binding transcriptional regulator domain | 8041898 | 3000513 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ssDNA-binding transcriptional regulator domain | 8041899 | 3000513 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PF09387 | e2gjeA1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF09387 | ECOD (1.6) |
D | PF09387 | e2gjeD1 | A: a+b two layers | X: ssDNA-binding transcriptional regulator domain-like | H: ssDNA-binding transcriptional regulator domain (From Topology) | T: ssDNA-binding transcriptional regulator domain | F: PF09387 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 2.30.31.40 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
D | 2.30.31.40 | Mainly Beta | Roll | Transcriptional Co-activator pc4 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF09387 | Mitochondrial RNA binding protein MRP (MRP) | Mitochondrial RNA binding protein MRP | MRP1 and MRP2 are mitochondrial RNA binding proteins that form a heteromeric complex. The MRP1/MRP2 heterotetrameric complex binds to guide RNAs and stabilises them in an unfolded conformation suitable for RNA-RNA hybridisation. Each MRP subunit ad ... | Domain |
PF09387 | Mitochondrial RNA binding protein MRP (MRP) | Mitochondrial RNA binding protein MRP | MRP1 and MRP2 are mitochondrial RNA binding proteins that form a heteromeric complex. The MRP1/MRP2 heterotetrameric complex binds to guide RNAs and stabilises them in an unfolded conformation suitable for RNA-RNA hybridisation. Each MRP subunit ad ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR009044 | ssDNA-binding transcriptional regulator | Homologous Superfamily |
C [auth A] | IPR032680 | SUN domain-containing protein 1, N-terminal | Domain |
IPR009044 | ssDNA-binding transcriptional regulator | Homologous Superfamily | |
IPR032680 | SUN domain-containing protein 1, N-terminal | Domain |