2GE8
Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
C [auth F] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
G [auth I] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
H [auth J] | SCOP2B Superfamily | Nucleocapsid protein dimerization domain | 8041817 | 3001606 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00937 | e2ge8A1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
B | PF00937 | e2ge8B1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
C [auth F] | PF00937 | e2ge8F1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
D [auth G] | PF00937 | e2ge8G1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
E [auth C] | PF00937 | e2ge8C1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
F [auth D] | PF00937 | e2ge8D1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
G [auth I] | PF00937 | e2ge8I1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
H [auth J] | PF00937 | e2ge8J1 | A: a+b duplicates or obligate multimers | X: Arterivirus nucleocapsid protein (From Topology) | H: Arterivirus nucleocapsid protein (From Topology) | T: Arterivirus nucleocapsid protein | F: PF00937 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00937 | Coronavirus nucleocapsid (CoV_nucleocap) | Coronavirus nucleocapsid | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001218 | Nucleocapsid protein, coronavirus | Family | |
IPR044344 | Nucleocapsid (N) protein, C-terminal domain, coronavirus | Domain | |
IPR042547 | Nucleocapsid protein, gammacoronavirus | Family | |
IPR037195 | Nucleocapsid protein, N-terminal | Homologous Superfamily | |
IPR037179 | Nucleocapsid protein, C-terminal | Homologous Superfamily | |
IPR044345 | Nucleocapsid (N) protein, N-terminal domain, coronavirus | Domain |