Annotations: 2FIP

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Phage phi29 transcription regulator p4	8047248	4005527	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF05464	e2fipA1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)
B	PF05464	e2fipB1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)
C	PF05464	e2fipC1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)
D	PF05464	e2fipD1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)
E	PF05464	e2fipE1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)
F	PF05464	e2fipF1	A: a+b three layers	X: Late genes activator p4 (From Topology)	H: Late genes activator p4 (From Topology)	T: Late genes activator p4	F: PF05464	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
B	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
C	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
D	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
E	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
F	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF05464	Phi-29-like late genes activator (early protein GP4) (Phi-29_GP4)	Phi-29-like late genes activator (early protein GP4)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Late genes activator	DNA binding binding organic cyclic compound binding nucleic acid binding DNA-directed 5'-3' RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups transcription regulator activity DNA binding binding organic cyclic compound binding nucleic acid binding DNA-directed 5'-3' RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups transcription regulator activity DNA-binding transcription factor activity sigma factor activity	regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process cellular metabolic process biological regulation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process organic cyclic compound biosynthetic process metabolic process regulation of macromolecule biosynthetic process cellular process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR038246	Phi-29-like late genes activator superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR008771	Phi-29-like late genes activator	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.