2D4A
Structure of the malate dehydrogenase from Aeropyrum pernix
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | LDH/MDH/AglA-like | 8059746 | 3000039 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | LDH/MDH/AglA-like | 8059746 | 3000039 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | LDH/MDH/AglA-like | 8059746 | 3000039 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2 Family | LDH/MDH-like | 8059745 | 4000045 | SCOP2 (2022-06-29) |
D [auth A] | SCOP2 Superfamily | LDH/MDH/AglA-like | 8059746 | 3000039 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF02866 | e2d4aB3 | A: a+b complex topology | X: LDH C-terminal domain-like (From Topology) | H: LDH C-terminal domain-like (From Topology) | T: LDH C-terminal domain-like | F: PF02866 | ECOD (1.6) |
A [auth B] | PF00056 | e2d4aB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00056 | ECOD (1.6) |
B [auth D] | PF02866 | e2d4aD3 | A: a+b complex topology | X: LDH C-terminal domain-like (From Topology) | H: LDH C-terminal domain-like (From Topology) | T: LDH C-terminal domain-like | F: PF02866 | ECOD (1.6) |
B [auth D] | PF00056 | e2d4aD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00056 | ECOD (1.6) |
C | PF02866 | e2d4aC3 | A: a+b complex topology | X: LDH C-terminal domain-like (From Topology) | H: LDH C-terminal domain-like (From Topology) | T: LDH C-terminal domain-like | F: PF02866 | ECOD (1.6) |
C | PF00056 | e2d4aC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00056 | ECOD (1.6) |
D [auth A] | PF02866 | e2d4aA2 | A: a+b complex topology | X: LDH C-terminal domain-like (From Topology) | H: LDH C-terminal domain-like (From Topology) | T: LDH C-terminal domain-like | F: PF02866 | ECOD (1.6) |
D [auth A] | PF00056 | e2d4aA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00056 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
A [auth B] | 3.90.110.10 | Alpha Beta | Alpha-Beta Complex | L-2-Hydroxyisocaproate Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
B [auth D] | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B [auth D] | 3.90.110.10 | Alpha Beta | Alpha-Beta Complex | L-2-Hydroxyisocaproate Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
C | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
C | 3.90.110.10 | Alpha Beta | Alpha-Beta Complex | L-2-Hydroxyisocaproate Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
D [auth A] | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
D [auth A] | 3.90.110.10 | Alpha Beta | Alpha-Beta Complex | L-2-Hydroxyisocaproate Dehydrogenase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth D], C, D [auth A] | PF02866 | lactate/malate dehydrogenase, alpha/beta C-terminal domain (Ldh_1_C) | lactate/malate dehydrogenase, alpha/beta C-terminal domain | L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the in ... | Domain |
A [auth B], B [auth D], C, D [auth A] | PF00056 | lactate/malate dehydrogenase, NAD binding domain (Ldh_1_N) | lactate/malate dehydrogenase, NAD binding domain | L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the in ... | Domain |