1M1C
Structure of the L-A virus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1m1ca_ | Multi-domain proteins (alpha and beta) | L-A virus major coat protein | L-A virus major coat protein | L-A virus major coat protein | L-A virus major coat protein | (Saccharomyces cerevisiae virus L-A ) [TaxId: 11008 ], | SCOPe (2.08) |
B | d1m1cb_ | Multi-domain proteins (alpha and beta) | L-A virus major coat protein | L-A virus major coat protein | L-A virus major coat protein | L-A virus major coat protein | (Saccharomyces cerevisiae virus L-A ) [TaxId: 11008 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | L-A virus major coat protein | 8030801 | 4003386 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | L-A virus major coat protein | 8043180 | 3000747 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | L-A virus major coat protein | 8043180 | 3000747 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LA-virus_coat | e1m1cA1 | A: a+b complex topology | X: L-A virus major coat protein-related (From Topology) | H: L-A virus major coat protein-related (From Topology) | T: L-A virus major coat protein-related | F: LA-virus_coat | ECOD (1.6) |
B | LA-virus_coat | e1m1cB1 | A: a+b complex topology | X: L-A virus major coat protein-related (From Topology) | H: L-A virus major coat protein-related (From Topology) | T: L-A virus major coat protein-related | F: LA-virus_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1840.10 | Alpha Beta | Alpha-Beta Complex | Major capsid protein | Major capsid protein | CATH (4.3.0) |
B | 3.90.1840.10 | Alpha Beta | Alpha-Beta Complex | Major capsid protein | Major capsid protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09220 | L-A virus, major coat protein (LA-virus_coat) | L-A virus, major coat protein | Members of this family form the major coat protein of the Saccharomyces cerevisiae L-A virus [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Major coat protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036332 | L-A virus major coat protein superfamily | Homologous Superfamily | |
IPR015302 | Major coat protein, L-A virus | Domain |