1KJK
Solution structure of the lambda integrase amino-terminal domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1kjka_ | Alpha and beta proteins (a+b) | DNA-binding domain | DNA-binding domain | lambda integrase N-terminal domain | lambda integrase N-terminal domain | (Lambdavirus lambda ) [TaxId: 10710 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DNA-binding domain | 8035081 | 3000183 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.160.60 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | Classic Zinc Finger | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09003 | Bacteriophage lambda integrase, Arm DNA-binding domain (Arm-DNA-bind_1) | Bacteriophage lambda integrase, Arm DNA-binding domain | The amino terminal domain of bacteriophage lambda integrase folds into a three-stranded, antiparallel beta-sheet that packs against a C-terminal alpha-helix, adopting a fold that is structurally related to the three-stranded beta-sheet family of DNA- ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011010 | DNA breaking-rejoining enzyme, catalytic core | Homologous Superfamily | |
IPR010998 | Integrase/recombinase, N-terminal | Homologous Superfamily | |
IPR015094 | Integrase, lambda-type, N-terminal DNA-binding | Domain | |
IPR044068 | Core-binding (CB) domain | Domain | |
IPR002104 | Integrase, catalytic domain | Domain | |
IPR004107 | Integrase, SAM-like, N-terminal | Domain | |
IPR013762 | Integrase-like, catalytic domain superfamily | Homologous Superfamily | |
IPR016177 | DNA-binding domain superfamily | Homologous Superfamily |